Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG88836.1 | OJG88837.1 | RV16_GL002416 | RV16_GL002417 | Ribose-phosphate pyrophosphokinase. | Cysteine desulfurase. | 0.816 |
OJG88836.1 | OJG88838.1 | RV16_GL002416 | RV16_GL002418 | Ribose-phosphate pyrophosphokinase. | Hypothetical protein. | 0.779 |
OJG88836.1 | OJG89299.1 | RV16_GL002416 | RV16_GL002371 | Ribose-phosphate pyrophosphokinase. | Protein RarD. | 0.636 |
OJG88837.1 | OJG88836.1 | RV16_GL002417 | RV16_GL002416 | Cysteine desulfurase. | Ribose-phosphate pyrophosphokinase. | 0.816 |
OJG88837.1 | OJG88838.1 | RV16_GL002417 | RV16_GL002418 | Cysteine desulfurase. | Hypothetical protein. | 0.907 |
OJG88837.1 | OJG89299.1 | RV16_GL002417 | RV16_GL002371 | Cysteine desulfurase. | Protein RarD. | 0.636 |
OJG88838.1 | OJG88836.1 | RV16_GL002418 | RV16_GL002416 | Hypothetical protein. | Ribose-phosphate pyrophosphokinase. | 0.779 |
OJG88838.1 | OJG88837.1 | RV16_GL002418 | RV16_GL002417 | Hypothetical protein. | Cysteine desulfurase. | 0.907 |
OJG88838.1 | OJG89299.1 | RV16_GL002418 | RV16_GL002371 | Hypothetical protein. | Protein RarD. | 0.459 |
OJG89297.1 | OJG89298.1 | RV16_GL002369 | RV16_GL002370 | Hypothetical protein. | Hypothetical protein. | 0.580 |
OJG89297.1 | OJG89299.1 | RV16_GL002369 | RV16_GL002371 | Hypothetical protein. | Protein RarD. | 0.526 |
OJG89298.1 | OJG89297.1 | RV16_GL002370 | RV16_GL002369 | Hypothetical protein. | Hypothetical protein. | 0.580 |
OJG89298.1 | OJG89299.1 | RV16_GL002370 | RV16_GL002371 | Hypothetical protein. | Protein RarD. | 0.697 |
OJG89298.1 | OJG89300.1 | RV16_GL002370 | RV16_GL002372 | Hypothetical protein. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.439 |
OJG89299.1 | OJG88836.1 | RV16_GL002371 | RV16_GL002416 | Protein RarD. | Ribose-phosphate pyrophosphokinase. | 0.636 |
OJG89299.1 | OJG88837.1 | RV16_GL002371 | RV16_GL002417 | Protein RarD. | Cysteine desulfurase. | 0.636 |
OJG89299.1 | OJG88838.1 | RV16_GL002371 | RV16_GL002418 | Protein RarD. | Hypothetical protein. | 0.459 |
OJG89299.1 | OJG89297.1 | RV16_GL002371 | RV16_GL002369 | Protein RarD. | Hypothetical protein. | 0.526 |
OJG89299.1 | OJG89298.1 | RV16_GL002371 | RV16_GL002370 | Protein RarD. | Hypothetical protein. | 0.697 |
OJG89299.1 | OJG89300.1 | RV16_GL002371 | RV16_GL002372 | Protein RarD. | tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family. | 0.490 |
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