STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msm_1069Energy-converting hydrogenase B, subunit H, EhbH; COG2111. (92 aa)    
Predicted Functional Partners:
Msm_1071
Energy-converting hydrogenase B, subunit F, EhbF; COG0651.
  
 
 0.993
Msm_1072
Energy-converting hydrogenase B, subunit E, EhbE; COG1006.
  
 
 0.991
Msm_1074
Energy-converting hydrogenase B, subunit C, EhbC; COG1320.
  
 
 0.987
Msm_1065
Energy-converting hydrogenase B, subunit L, EhbL; COG1143.
  
 
 0.986
Msm_1075
Energy-converting hydrogenase B, subunit B, EhbB; COG2212.
  
 
 0.983
Msm_1076
Energy-converting hydrogenase B, subunit A, EhbA; COG1863.
  
 
 0.976
Msm_1068
Energy-converting hydrogenase B, subunit I, EhbI; COG2111.
   
 
 0.975
Msm_1064
Energy-converting hydrogenase B, subunit M, EhbM; COG3260.
  
   0.972
Msm_1070
Energy-converting hydrogenase B, subunit G, EhbG.
  
    0.971
Msm_1073
Energy-converting hydrogenase B, subunit D, EhbD; COG1563.
   
 
 0.968
Your Current Organism:
Methanobrevibacter smithii
NCBI taxonomy Id: 420247
Other names: M. smithii ATCC 35061, Methanobrevibacter smithii ATCC 35061, Methanobrevibacter smithii DSM 861, Methanobrevibacter smithii PS, Methanobrevibacter smithii str. ATCC 35061, Methanobrevibacter smithii strain ATCC 35061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.