STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msm_1324Glycosyltransferase, GT2 family; COG0463. (344 aa)    
Predicted Functional Partners:
Msm_1322
Glycosyltransferase (glycogen phosphorylase), GT1 family; COG0438.
 
     0.814
Msm_1323
Glycosyltransferase, GT2 family; COG0463.
 
    
0.780
Msm_1321
Predicted glycosyltransferase, GT2 family; COG1216.
       0.728
Msm_1320
Possible glycosyltransferase.
       0.723
Msm_1327
Predicted CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; COG1887.
  
 0.687
Msm_1328
Glycosyltransferase, GT2 family; COG0463.
 
    
0.598
Msm_1326
Polysaccharide/polyol phosphate ABC transporter, ATPase component; COG1134.
  
  
 0.593
Msm_1325
Predicted polysaccharide/polyol phosphate ABC transporter, permease component.
  
  
 0.588
Msm_1329
Predicted glycosyltransferase, GT2 family; COG1216.
 
  
 0.585
Msm_1330
Predicted glycosyltransferase, GT2 family; COG1216.
 
  
0.538
Your Current Organism:
Methanobrevibacter smithii
NCBI taxonomy Id: 420247
Other names: M. smithii ATCC 35061, Methanobrevibacter smithii ATCC 35061, Methanobrevibacter smithii DSM 861, Methanobrevibacter smithii PS, Methanobrevibacter smithii str. ATCC 35061, Methanobrevibacter smithii strain ATCC 35061
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.