STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000517005_03091Unannotated protein. (320 aa)    
Predicted Functional Partners:
GCA_000517005_09568
Unannotated protein.
  
     0.774
GCA_000517005_03793
Unannotated protein.
  
     0.741
GCA_000517005_02226
Unannotated protein.
  
     0.599
GCA_000517005_01653
Unannotated protein.
  
     0.595
GCA_000517005_00507
Unannotated protein.
  
     0.566
GCA_000517005_02027
Unannotated protein.
  
     0.547
GCA_000517005_09722
Unannotated protein.
  
     0.507
GCA_000517005_08308
Unannotated protein.
  
     0.485
GCA_000517005_01392
Unannotated protein.
  
     0.442
GCA_000517005_03090
Unannotated protein.
       0.434
Your Current Organism:
Microvirga lupini
NCBI taxonomy Id: 420324
Other names: HAMBI 3236, LMG 26460, LMG:26460, M. lupini, Microvirga lupini Ardley et al. 2012, Microvirga sp. Llb5, Microvirga sp. Lut6, Rhizobiales bacterium Lut6, strain Lut6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.