STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000517005_08500Unannotated protein. (548 aa)    
Predicted Functional Partners:
GCA_000517005_08503
Unannotated protein.
 
     0.831
GCA_000517005_08501
Unannotated protein.
 
     0.786
GCA_000517005_08502
Unannotated protein.
 
     0.784
GCA_000517005_08504
Unannotated protein.
 
     0.764
GCA_000517005_08505
Unannotated protein.
       0.604
GCA_000517005_02294
Unannotated protein.
    
  0.583
GCA_000517005_05643
Unannotated protein.
    
  0.583
GCA_000517005_07212
Unannotated protein.
    
  0.443
GCA_000517005_01423
Unannotated protein.
    
  0.419
GCA_000517005_00480
Unannotated protein.
    
  0.409
Your Current Organism:
Microvirga lupini
NCBI taxonomy Id: 420324
Other names: HAMBI 3236, LMG 26460, LMG:26460, M. lupini, Microvirga lupini Ardley et al. 2012, Microvirga sp. Llb5, Microvirga sp. Lut6, Rhizobiales bacterium Lut6, strain Lut6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.