STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000171335_00188Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_000171335_00187
Unannotated protein.
  
  
 0.960
GCA_000171335_00189
Unannotated protein.
       0.860
GCA_000171335_00190
Unannotated protein.
       0.860
GCA_000171335_00967
Unannotated protein.
  
     0.736
GCA_000171335_00186
Unannotated protein.
       0.727
GCA_000171335_01381
Unannotated protein.
 
     0.663
GCA_000171335_01382
Unannotated protein.
 
     0.597
GCA_000171335_00185
Unannotated protein.
 
     0.573
GCA_000171335_00759
Unannotated protein.
  
     0.509
GCA_000171335_00529
Unannotated protein.
 
     0.507
Your Current Organism:
Epulopiscium sp. Nt morphotype
NCBI taxonomy Id: 420336
Other names: E. sp. 'N.t. morphotype B', Epulopiscium sp. 'N.t. morphotype B'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.