STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000171335_00530Unannotated protein. (206 aa)    
Predicted Functional Partners:
GCA_000171335_00798
Unannotated protein.
    
  0.808
GCA_000171335_00531
Unannotated protein.
  
    0.771
GCA_000171335_01627
Unannotated protein.
 
   
 0.694
GCA_000171335_00495
Unannotated protein.
   
  
 0.673
GCA_000171335_02010
Unannotated protein.
   
    0.641
GCA_000171335_01519
Unannotated protein.
 
     0.545
GCA_000171335_00532
Unannotated protein.
       0.517
GCA_000171335_01679
Unannotated protein.
 
  
  0.483
GCA_000171335_00464
Unannotated protein.
 
  
  0.480
GCA_000171335_00534
Unannotated protein.
    
  0.472
Your Current Organism:
Epulopiscium sp. Nt morphotype
NCBI taxonomy Id: 420336
Other names: E. sp. 'N.t. morphotype B', Epulopiscium sp. 'N.t. morphotype B'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.