STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000171335_01048Unannotated protein. (127 aa)    
Predicted Functional Partners:
GCA_000171335_01049
Unannotated protein.
 
 
 0.991
GCA_000171335_00907
Unannotated protein.
 
  
 0.986
GCA_000171335_01685
Unannotated protein.
 
 
 0.983
GCA_000171335_00914
Unannotated protein.
  
 
 0.981
GCA_000171335_01689
Unannotated protein.
 
 
 0.978
GCA_000171335_01892
Unannotated protein.
  
  
 0.976
GCA_000171335_00992
Unannotated protein.
 
  
 0.955
GCA_000171335_01688
Unannotated protein.
 
 
 0.950
GCA_000171335_00906
Unannotated protein.
 
  
 0.946
GCA_000171335_00900
Unannotated protein.
 
  
 0.942
Your Current Organism:
Epulopiscium sp. Nt morphotype
NCBI taxonomy Id: 420336
Other names: E. sp. 'N.t. morphotype B', Epulopiscium sp. 'N.t. morphotype B'
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.