STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH36306.1Outer membrane protein TolC. (438 aa)    
Predicted Functional Partners:
SEH36299.1
Membrane fusion protein, multidrug efflux system.
 
  0.965
SEH36295.1
Hypothetical protein.
 
    0.942
SEH49063.1
Membrane fusion protein, multidrug efflux system.
 
  0.859
SEH36236.1
Membrane fusion protein, multidrug efflux system.
 
  0.823
SEH49185.1
Membrane fusion protein, multidrug efflux system.
  
  0.788
SEH49045.1
Major Facilitator Superfamily protein.
  
    0.741
SEH36312.1
Transcriptional regulator, AraC family.
 
     0.631
SEH49081.1
Outer membrane protein TolC.
  
  
 
0.626
SEH39577.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.612
SEH62456.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.612
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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