Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH41160.1 | SEH41172.1 | SAMN05421793_10323 | SAMN05421793_10324 | Carboxypeptidase regulatory-like domain-containing protein. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.592 |
SEH41160.1 | SEH41206.1 | SAMN05421793_10323 | SAMN05421793_10326 | Carboxypeptidase regulatory-like domain-containing protein. | Hypothetical protein. | 0.516 |
SEH41160.1 | SEH41224.1 | SAMN05421793_10323 | SAMN05421793_10327 | Carboxypeptidase regulatory-like domain-containing protein. | Hypothetical protein. | 0.516 |
SEH41160.1 | nadB | SAMN05421793_10323 | SAMN05421793_10325 | Carboxypeptidase regulatory-like domain-containing protein. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.592 |
SEH41172.1 | SEH41160.1 | SAMN05421793_10324 | SAMN05421793_10323 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Carboxypeptidase regulatory-like domain-containing protein. | 0.592 |
SEH41172.1 | SEH41206.1 | SAMN05421793_10324 | SAMN05421793_10326 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Hypothetical protein. | 0.668 |
SEH41172.1 | SEH41224.1 | SAMN05421793_10324 | SAMN05421793_10327 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Hypothetical protein. | 0.668 |
SEH41172.1 | SEH41244.1 | SAMN05421793_10324 | SAMN05421793_10328 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.434 |
SEH41172.1 | nadB | SAMN05421793_10324 | SAMN05421793_10325 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.998 |
SEH41172.1 | thiD | SAMN05421793_10324 | SAMN05421793_10329 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.472 |
SEH41172.1 | thiE | SAMN05421793_10324 | SAMN05421793_10330 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.438 |
SEH41172.1 | thiM | SAMN05421793_10324 | SAMN05421793_10331 | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family. | 0.434 |
SEH41206.1 | SEH41160.1 | SAMN05421793_10326 | SAMN05421793_10323 | Hypothetical protein. | Carboxypeptidase regulatory-like domain-containing protein. | 0.516 |
SEH41206.1 | SEH41172.1 | SAMN05421793_10326 | SAMN05421793_10324 | Hypothetical protein. | Nicotinate-nucleotide pyrophosphorylase [carboxylating]; Belongs to the NadC/ModD family. | 0.668 |
SEH41206.1 | SEH41224.1 | SAMN05421793_10326 | SAMN05421793_10327 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEH41206.1 | SEH41244.1 | SAMN05421793_10326 | SAMN05421793_10328 | Hypothetical protein. | Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family. | 0.494 |
SEH41206.1 | SEH44136.1 | SAMN05421793_10326 | SAMN05421793_10467 | Hypothetical protein. | Antitoxin ParD1/3/4. | 0.555 |
SEH41206.1 | nadB | SAMN05421793_10326 | SAMN05421793_10325 | Hypothetical protein. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.668 |
SEH41206.1 | thiD | SAMN05421793_10326 | SAMN05421793_10329 | Hypothetical protein. | Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase. | 0.494 |
SEH41206.1 | thiE | SAMN05421793_10326 | SAMN05421793_10330 | Hypothetical protein. | Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family. | 0.494 |
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