STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH41986.1Prokaryotic molybdopterin-containing oxidoreductase family, iron-sulfur binding subunit. (1019 aa)    
Predicted Functional Partners:
SEH41974.1
Cytochrome c2.
 
 0.999
SEH42026.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
 
 0.999
SEH42044.1
Protein of unknown function.
 
 0.999
SEH42058.1
Cytochrome c, mono-and diheme variants.
 
 0.999
SEH42074.1
Hypothetical protein.
 
 
 
 0.999
SEH77510.1
Cytochrome c oxidase cbb3-type subunit 3.
 
 0.899
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.835
SEH76817.1
Hypothetical protein.
   
 
 0.835
SEH60377.1
Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
 0.819
SEH83433.1
Allosteric NADP-dependent malic enzyme.
    
 0.738
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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