Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH44098.1 | SEH44113.1 | SAMN05421793_10463 | SAMN05421793_10465 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Hypothetical protein. | 0.579 |
SEH44098.1 | SEH56356.1 | SAMN05421793_10463 | SAMN05421793_11219 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 2-oxoisovalerate dehydrogenase E1 component. | 0.527 |
SEH44113.1 | SEH44098.1 | SAMN05421793_10465 | SAMN05421793_10463 | Hypothetical protein. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.579 |
SEH44113.1 | SEH44124.1 | SAMN05421793_10465 | SAMN05421793_10466 | Hypothetical protein. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.467 |
SEH44113.1 | SEH44262.1 | SAMN05421793_10465 | SAMN05421793_10478 | Hypothetical protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.675 |
SEH44113.1 | SEH48850.1 | SAMN05421793_10465 | SAMN05421793_1074 | Hypothetical protein. | Glycosidase; Belongs to the glycosyl hydrolase 13 family. | 0.592 |
SEH44113.1 | SEH52513.1 | SAMN05421793_10465 | SAMN05421793_10961 | Hypothetical protein. | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 0.480 |
SEH44113.1 | SEH56356.1 | SAMN05421793_10465 | SAMN05421793_11219 | Hypothetical protein. | 2-oxoisovalerate dehydrogenase E1 component. | 0.439 |
SEH44113.1 | SEH81745.1 | SAMN05421793_10465 | SAMN05421793_13422 | Hypothetical protein. | Hypothetical protein. | 0.452 |
SEH44113.1 | ribB | SAMN05421793_10465 | SAMN05421793_1399 | Hypothetical protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.438 |
SEH44124.1 | SEH44113.1 | SAMN05421793_10466 | SAMN05421793_10465 | Amino acid/polyamine/organocation transporter, APC superfamily. | Hypothetical protein. | 0.467 |
SEH44124.1 | SEH48850.1 | SAMN05421793_10466 | SAMN05421793_1074 | Amino acid/polyamine/organocation transporter, APC superfamily. | Glycosidase; Belongs to the glycosyl hydrolase 13 family. | 0.758 |
SEH44262.1 | SEH44113.1 | SAMN05421793_10478 | SAMN05421793_10465 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | Hypothetical protein. | 0.675 |
SEH44262.1 | ribB | SAMN05421793_10478 | SAMN05421793_1399 | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.999 |
SEH48850.1 | SEH44113.1 | SAMN05421793_1074 | SAMN05421793_10465 | Glycosidase; Belongs to the glycosyl hydrolase 13 family. | Hypothetical protein. | 0.592 |
SEH48850.1 | SEH44124.1 | SAMN05421793_1074 | SAMN05421793_10466 | Glycosidase; Belongs to the glycosyl hydrolase 13 family. | Amino acid/polyamine/organocation transporter, APC superfamily. | 0.758 |
SEH52513.1 | SEH44113.1 | SAMN05421793_10961 | SAMN05421793_10465 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | Hypothetical protein. | 0.480 |
SEH52513.1 | SEH56356.1 | SAMN05421793_10961 | SAMN05421793_11219 | NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. | 2-oxoisovalerate dehydrogenase E1 component. | 0.547 |
SEH56356.1 | SEH44098.1 | SAMN05421793_11219 | SAMN05421793_10463 | 2-oxoisovalerate dehydrogenase E1 component. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.527 |
SEH56356.1 | SEH44113.1 | SAMN05421793_11219 | SAMN05421793_10465 | 2-oxoisovalerate dehydrogenase E1 component. | Hypothetical protein. | 0.439 |
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