STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH44136.1Antitoxin ParD1/3/4. (82 aa)    
Predicted Functional Partners:
SEH44148.1
Toxin ParE1/3/4; Belongs to the RelE toxin family.
 
   0.980
SEH44124.1
Amino acid/polyamine/organocation transporter, APC superfamily.
       0.586
SEH36908.1
Plasmid stabilization system protein ParE.
   
   0.555
SEH41206.1
Hypothetical protein.
   
   0.555
SEH43884.1
Plasmid stabilization system protein ParE.
   
   0.555
SEH44007.1
Plasmid stabilization system protein ParE.
   
   0.555
SEH51908.1
Plasmid stabilization system protein ParE.
   
   0.555
SEH52266.1
Hypothetical protein.
   
   0.555
SEH52576.1
Plasmid stabilization system protein ParE.
   
   0.555
SEH59570.1
Plasmid stabilization system protein ParE.
   
   0.555
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.