STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH50852.1HAMP domain-containing protein. (484 aa)    
Predicted Functional Partners:
SEH58502.1
Response regulator receiver domain-containing protein.
 
 
 0.992
SEH58481.1
Signal transduction histidine kinase.
 
 
 0.990
SEH49355.1
DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.
 
 
 0.970
SEH46098.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 
0.924
SEH98120.1
PAS domain S-box-containing protein.
 
0.887
SEH76725.1
Monosaccharide ABC transporter substrate-binding protein, CUT2 family.
   
0.868
SEH43588.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
 
  0.853
SEH82678.1
Response regulator receiver domain-containing protein.
  
 
  0.842
SEH38431.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
  
 
  0.823
SEH64212.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
 
  0.810
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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