STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH51784.1N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. (387 aa)    
Predicted Functional Partners:
SEH50641.1
Bacillithiol biosynthesis deacetylase BshB1.
  
 
  0.790
bshC
Bacillithiol biosynthesis cysteine-adding enzyme BshC; Belongs to the BshC family.
  
     0.775
SEH41527.1
Putative bacilliredoxin, YphP/YqiW family; Belongs to the UPF0403 family.
  
     0.770
SEH62594.1
Thioredoxin reductase (NADPH).
  
     0.644
SEH93573.1
Por secretion system C-terminal sorting domain-containing protein; Belongs to the glycosyl hydrolase 13 family.
   
  0.630
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.630
SEH69984.1
Bacillithiol system protein YtxJ.
  
     0.592
SEH51801.1
Protein of unknown function.
       0.548
SEH51770.1
GxxExxY protein.
       0.529
SEH56778.1
Protein of unknown function.
  
     0.522
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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