STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH52428.1Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB. (511 aa)    
Predicted Functional Partners:
SEH44515.1
Cell division transport system permease protein; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.941
SEH58481.1
Signal transduction histidine kinase.
    
 0.905
SEH52446.1
Protein of unknown function.
 
     0.848
SEH80919.1
Tetratricopeptide repeat-containing protein.
 
 0.745
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.694
SEH50965.1
Glycosyltransferase involved in cell wall bisynthesis.
   
   0.670
SEH50986.1
Glycosyltransferase, GT2 family.
   
   0.670
SEH95261.1
Hypothetical protein.
 
 
   0.662
SEH52380.1
Hypothetical protein.
       0.649
SEH52398.1
Protein of unknown function.
       0.649
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.