STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH53747.1Predicted ABC-type ATPase. (195 aa)    
Predicted Functional Partners:
SEH53763.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
       0.559
SEH58593.1
Helix-turn-helix.
    
 
 0.497
SEH76106.1
Hypothetical protein.
    
 
 0.497
SEH76748.1
Helix-turn-helix.
    
 
 0.497
SEH78904.1
Helix-turn-helix.
    
 
 0.497
SEH83963.1
Hypothetical protein.
    
 
 0.497
SEH97219.1
Hypothetical protein.
    
 
 0.497
SEH97895.1
Hypothetical protein.
    
 
 0.497
SEH60921.1
Predicted nuclease of restriction endonuclease-like (RecB) superfamily, DUF1016 family.
  
     0.493
SEH53715.1
AhpC/TSA family protein.
       0.485
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.