STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH53763.1ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. (375 aa)    
Predicted Functional Partners:
SEH56241.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 0.988
SEH56273.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 0.988
SEH56256.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 0.986
SEH56291.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 0.986
SEH55256.1
Glutamate synthase (NADPH/NADH) small chain.
   
 0.968
SEH49734.1
Hypothetical protein.
  
 0.953
SEH56185.1
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
 
 0.949
SEH70847.1
acyl-CoA thioesterase.
 
 
  0.930
SEH56324.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
  
0.928
SEH70827.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.913
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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