STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH53809.1Septum formation initiator. (116 aa)    
Predicted Functional Partners:
SEH41474.1
Cell division protein FtsQ.
 
 
 
 0.998
SEH53793.1
Uridine kinase.
       0.822
SEH53822.1
methylmalonyl-CoA mutase.
       0.822
SEH80982.1
Hypothetical protein.
  
     0.723
SEH38563.1
Protein of unknown function.
  
     0.693
SEH84950.1
Branched-chain amino acid aminotransferase.
 
     0.669
SEH86609.1
Rod shape-determining protein MreD.
  
     0.654
SEH84971.1
Hypothetical protein.
  
     0.643
SEH89055.1
Uncharacterized membrane protein YphA, DoxX/SURF4 family.
  
     0.627
SEH38323.1
Tetratricopeptide repeat-containing protein.
  
     0.615
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.