Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH36284.1 | SEH36757.1 | SAMN05421793_10135 | SAMN05421793_101100 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 0.899 |
SEH36284.1 | SEH55238.1 | SAMN05421793_10135 | SAMN05421793_11131 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Glutamate synthase (NADPH/NADH) large chain. | 0.730 |
SEH36284.1 | SEH56422.1 | SAMN05421793_10135 | SAMN05421793_11224 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.804 |
SEH36284.1 | SEH87910.1 | SAMN05421793_10135 | SAMN05421793_14415 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.530 |
SEH36284.1 | fabD | SAMN05421793_10135 | SAMN05421793_11526 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | [acyl-carrier-protein] S-malonyltransferase. | 0.909 |
SEH36284.1 | fabH | SAMN05421793_10135 | SAMN05421793_10148 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.899 |
SEH36284.1 | fabZ | SAMN05421793_10135 | SAMN05421793_11138 | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.897 |
SEH36757.1 | SEH36284.1 | SAMN05421793_101100 | SAMN05421793_10135 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.899 |
SEH36757.1 | SEH56422.1 | SAMN05421793_101100 | SAMN05421793_11224 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.758 |
SEH36757.1 | SEH87910.1 | SAMN05421793_101100 | SAMN05421793_14415 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | Hypothetical protein. | 0.460 |
SEH36757.1 | fabD | SAMN05421793_101100 | SAMN05421793_11526 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | [acyl-carrier-protein] S-malonyltransferase. | 0.984 |
SEH36757.1 | fabH | SAMN05421793_101100 | SAMN05421793_10148 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. | 0.816 |
SEH36757.1 | fabZ | SAMN05421793_101100 | SAMN05421793_11138 | 3-oxoacyl-[acyl-carrier-protein] synthase-3. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.799 |
SEH55238.1 | SEH36284.1 | SAMN05421793_11131 | SAMN05421793_10135 | Glutamate synthase (NADPH/NADH) large chain. | 3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.730 |
SEH55238.1 | SEH56407.1 | SAMN05421793_11131 | SAMN05421793_11223 | Glutamate synthase (NADPH/NADH) large chain. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.590 |
SEH55238.1 | SEH56422.1 | SAMN05421793_11131 | SAMN05421793_11224 | Glutamate synthase (NADPH/NADH) large chain. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.730 |
SEH55238.1 | SEH87910.1 | SAMN05421793_11131 | SAMN05421793_14415 | Glutamate synthase (NADPH/NADH) large chain. | Hypothetical protein. | 0.821 |
SEH56375.1 | SEH56407.1 | SAMN05421793_11221 | SAMN05421793_11223 | Hypothetical protein. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.558 |
SEH56375.1 | SEH56422.1 | SAMN05421793_11221 | SAMN05421793_11224 | Hypothetical protein. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.601 |
SEH56407.1 | SEH55238.1 | SAMN05421793_11223 | SAMN05421793_11131 | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | Glutamate synthase (NADPH/NADH) large chain. | 0.590 |
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