STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH60377.1Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. (535 aa)    
Predicted Functional Partners:
SEH95846.1
Glycine dehydrogenase; Belongs to the GcvP family.
   
    0.999
SEH51846.1
Succinate dehydrogenase subunit A.
  
 
 0.997
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.
  
 
 0.997
SEH51830.1
Succinate dehydrogenase / fumarate reductase iron-sulfur subunit.
  
 
 0.985
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
  
 
 0.984
SEH56645.1
Citrate synthase; Belongs to the citrate synthase family.
  
 
 0.980
SEH83433.1
Allosteric NADP-dependent malic enzyme.
  
 
 0.962
mqo
Malate dehydrogenase (quinone).
     
 0.937
SEH76124.1
Malate synthase; Belongs to the malate synthase family.
     
 0.933
argH
Argininosuccinate lyase.
    
 0.932
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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