STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH61031.1Iron-regulated ABC transporter membrane component SufB. (482 aa)    
Predicted Functional Partners:
SEH61067.1
Fe-S cluster assembly ATP-binding protein.
 
 0.999
SEH40894.1
Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 0.991
SEH42107.1
FeS assembly SUF system protein.
   
 0.928
SEH61011.1
Iron-sulfur cluster assembly protein; Belongs to the HesB/IscA family.
  
 
 0.918
SEH42216.1
Cysteine desulfuration protein SufE.
 
   0.701
SEH80899.1
Hypothetical protein.
  
 
 0.689
SEH61088.1
Iron-regulated ABC transporter permease protein SufD.
 
   
0.617
SEH61050.1
GxxExxY protein.
  
    0.480
SEH60993.1
GLPGLI family protein.
       0.458
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.