STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH63194.1Hypothetical protein. (273 aa)    
Predicted Functional Partners:
SEH63175.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.892
SEH63147.1
4-amino-4-deoxy-L-arabinose transferase.
 
  
 0.886
SEH63213.1
CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
 0.785
SEH87262.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.469
SEH63232.1
DNA polymerase-3 subunit epsilon.
       0.465
SEH63250.1
Hypothetical protein.
       0.465
SEH60198.1
Endonuclease/Exonuclease/phosphatase family protein.
 
    0.454
SEH93008.1
Hypothetical protein.
  
     0.454
SEH51123.1
Conserved hypothetical protein.
 
     0.428
SEH63268.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
       0.418
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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