STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH64502.1Outer membrane protein beta-barrel domain-containing protein. (212 aa)    
Predicted Functional Partners:
SEH68299.1
ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).
  
     0.720
SEH64523.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
       0.691
SEH64542.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
       0.691
SEH90079.1
Hypothetical protein.
  
     0.673
SEH81575.1
Hypothetical protein.
  
     0.615
SEH71545.1
Hypothetical protein.
  
     0.610
SEH90612.1
Hypothetical protein.
  
     0.606
SEH90630.1
Hypothetical protein.
  
     0.605
SEH52446.1
Protein of unknown function.
 
    0.602
SEH64566.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
       0.594
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.