STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH65824.1Hypothetical protein. (374 aa)    
Predicted Functional Partners:
SEH83396.1
Cell surface protein SprA.
  
 
 0.999
SEH65807.1
Peptidase family C25.
 
   
 0.942
gldJ
Gliding motility-associated lipoprotein GldJ.
 
     0.876
SEH61280.1
Protein of unknown function.
  
   
 0.819
SEH41353.1
Cell division protein FtsI (penicillin-binding protein 3).
  
 
 0.795
SEH86597.1
Penicillin-binding protein 2.
  
 
 0.795
SEH60039.1
Hypothetical protein.
  
   
 0.777
SEH44306.1
Probable protein-translocating porin PorT.
  
   
 0.776
SEH41606.1
Protein of unknown function.
  
     0.774
SEH80820.1
Periplasmic chaperone for outer membrane proteins Skp.
  
    0.774
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.