STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH69963.1ZIP Zinc transporter. (230 aa)    
Predicted Functional Partners:
SEH69942.1
Methyltransferase domain-containing protein.
       0.787
SEH44330.1
Cell division protein ZapA.
  
     0.767
SEH80662.1
Arginase family enzyme.
  
     0.718
SEH91474.1
Uncharacterised ACR, YkgG family COG1556.
  
     0.681
SEH69921.1
Putative N6-adenine-specific DNA methylase; Belongs to the methyltransferase superfamily.
 
     0.676
SEH69984.1
Bacillithiol system protein YtxJ.
   
   0.674
SEH84709.1
Smr domain-containing protein.
  
    0.653
SEH52215.1
Hypothetical protein.
  
     0.644
SEH36198.1
Hypothetical protein.
  
     0.641
SEH52026.1
Transcription elongation factor, GreA/GreB family.
  
    0.638
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.