Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH36116.1 | SEH79029.1 | SAMN05421793_1013 | SAMN05421793_13110 | Protein of unknown function. | Helix-turn-helix domain-containing protein. | 0.412 |
SEH36116.1 | SEH79064.1 | SAMN05421793_1013 | SAMN05421793_13112 | Protein of unknown function. | Protein of unknown function. | 0.400 |
SEH36116.1 | SEH89214.1 | SAMN05421793_1013 | SAMN05421793_14626 | Protein of unknown function. | N-6 DNA Methylase. | 0.537 |
SEH49443.1 | SEH64959.1 | SAMN05421793_10745 | SAMN05421793_11759 | Por secretion system C-terminal sorting domain-containing protein. | Protein of unknown function. | 0.418 |
SEH49443.1 | SEH79064.1 | SAMN05421793_10745 | SAMN05421793_13112 | Por secretion system C-terminal sorting domain-containing protein. | Protein of unknown function. | 0.598 |
SEH49443.1 | SEH79432.1 | SAMN05421793_10745 | SAMN05421793_13134 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.695 |
SEH64959.1 | SEH49443.1 | SAMN05421793_11759 | SAMN05421793_10745 | Protein of unknown function. | Por secretion system C-terminal sorting domain-containing protein. | 0.418 |
SEH64959.1 | SEH79064.1 | SAMN05421793_11759 | SAMN05421793_13112 | Protein of unknown function. | Protein of unknown function. | 0.444 |
SEH79029.1 | SEH36116.1 | SAMN05421793_13110 | SAMN05421793_1013 | Helix-turn-helix domain-containing protein. | Protein of unknown function. | 0.412 |
SEH79029.1 | SEH79046.1 | SAMN05421793_13110 | SAMN05421793_13111 | Helix-turn-helix domain-containing protein. | VirE N-terminal domain-containing protein. | 0.941 |
SEH79029.1 | SEH79064.1 | SAMN05421793_13110 | SAMN05421793_13112 | Helix-turn-helix domain-containing protein. | Protein of unknown function. | 0.920 |
SEH79029.1 | SEH89214.1 | SAMN05421793_13110 | SAMN05421793_14626 | Helix-turn-helix domain-containing protein. | N-6 DNA Methylase. | 0.779 |
SEH79029.1 | SEH93881.1 | SAMN05421793_13110 | SAMN05421793_1576 | Helix-turn-helix domain-containing protein. | Copper chaperone CopZ. | 0.411 |
SEH79046.1 | SEH79029.1 | SAMN05421793_13111 | SAMN05421793_13110 | VirE N-terminal domain-containing protein. | Helix-turn-helix domain-containing protein. | 0.941 |
SEH79046.1 | SEH79064.1 | SAMN05421793_13111 | SAMN05421793_13112 | VirE N-terminal domain-containing protein. | Protein of unknown function. | 0.993 |
SEH79046.1 | SEH79432.1 | SAMN05421793_13111 | SAMN05421793_13134 | VirE N-terminal domain-containing protein. | Hypothetical protein. | 0.451 |
SEH79046.1 | SEH89214.1 | SAMN05421793_13111 | SAMN05421793_14626 | VirE N-terminal domain-containing protein. | N-6 DNA Methylase. | 0.660 |
SEH79064.1 | SEH36116.1 | SAMN05421793_13112 | SAMN05421793_1013 | Protein of unknown function. | Protein of unknown function. | 0.400 |
SEH79064.1 | SEH49443.1 | SAMN05421793_13112 | SAMN05421793_10745 | Protein of unknown function. | Por secretion system C-terminal sorting domain-containing protein. | 0.598 |
SEH79064.1 | SEH64959.1 | SAMN05421793_13112 | SAMN05421793_11759 | Protein of unknown function. | Protein of unknown function. | 0.444 |
page 1 of 2