STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH79522.1Transposase zinc-binding domain-containing protein. (123 aa)    
Predicted Functional Partners:
SEH79508.1
Putative transposase.
     0.994
SEH66785.1
Putative transposase.
 
     0.976
SEH94462.1
Putative transposase.
 
     0.973
SEH97767.1
Putative transposase.
 
     0.973
SEH37954.1
Putative transposase.
 
     0.972
SEH80533.1
Putative transposase.
 
     0.972
SEH96513.1
Putative transposase.
 
     0.972
SEH79538.1
Site-specific recombinase XerD.
 
     0.832
SEH98120.1
PAS domain S-box-containing protein.
   
 0.632
SEH58481.1
Signal transduction histidine kinase.
   
 0.623
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.