STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH80166.1Outer membrane receptor proteins, mostly Fe transport. (820 aa)    
Predicted Functional Partners:
SEH80182.1
Hypothetical protein.
     0.945
SEH49443.1
Por secretion system C-terminal sorting domain-containing protein.
  
     0.662
SEH49707.1
Catalase.
  
 
   0.630
SEH80198.1
Hypothetical protein.
       0.535
SEH42327.1
Hypothetical protein.
   
   0.533
SEH50688.1
Protein TonB.
   
   0.533
SEH85590.1
Protein TonB.
   
   0.533
SEH38731.1
Calcineurin-like phosphoesterase.
  
     0.506
SEH80214.1
Dipeptidase E; Belongs to the peptidase S51 family.
       0.453
SEH80230.1
Putative hydrolases of HD superfamily.
       0.447
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.