Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH37020.1 | SEH53161.1 | SAMN05421793_101124 | SAMN05421793_1101 | Chemotaxis protein MotB. | OmpA-OmpF porin, OOP family. | 0.594 |
SEH37020.1 | SEH81780.1 | SAMN05421793_101124 | SAMN05421793_13424 | Chemotaxis protein MotB. | OmpA family protein. | 0.518 |
SEH37020.1 | SEH94281.1 | SAMN05421793_101124 | SAMN05421793_1585 | Chemotaxis protein MotB. | OmpA-OmpF porin, OOP family. | 0.575 |
SEH37020.1 | SEH97290.1 | SAMN05421793_101124 | SAMN05421793_1746 | Chemotaxis protein MotB. | OmpA-OmpF porin, OOP family. | 0.607 |
SEH45650.1 | SEH53161.1 | SAMN05421793_10545 | SAMN05421793_1101 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | OmpA-OmpF porin, OOP family. | 0.466 |
SEH45650.1 | SEH61368.1 | SAMN05421793_10545 | SAMN05421793_11527 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.658 |
SEH45650.1 | SEH81780.1 | SAMN05421793_10545 | SAMN05421793_13424 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | OmpA family protein. | 0.496 |
SEH45650.1 | SEH94281.1 | SAMN05421793_10545 | SAMN05421793_1585 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | OmpA-OmpF porin, OOP family. | 0.466 |
SEH45650.1 | SEH97290.1 | SAMN05421793_10545 | SAMN05421793_1746 | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | OmpA-OmpF porin, OOP family. | 0.466 |
SEH52446.1 | SEH53161.1 | SAMN05421793_10957 | SAMN05421793_1101 | Protein of unknown function. | OmpA-OmpF porin, OOP family. | 0.727 |
SEH52446.1 | SEH61368.1 | SAMN05421793_10957 | SAMN05421793_11527 | Protein of unknown function. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.707 |
SEH52446.1 | SEH72372.1 | SAMN05421793_10957 | SAMN05421793_12325 | Protein of unknown function. | Hypothetical protein. | 0.492 |
SEH52446.1 | SEH81780.1 | SAMN05421793_10957 | SAMN05421793_13424 | Protein of unknown function. | OmpA family protein. | 0.625 |
SEH52446.1 | SEH94281.1 | SAMN05421793_10957 | SAMN05421793_1585 | Protein of unknown function. | OmpA-OmpF porin, OOP family. | 0.727 |
SEH52446.1 | SEH97290.1 | SAMN05421793_10957 | SAMN05421793_1746 | Protein of unknown function. | OmpA-OmpF porin, OOP family. | 0.700 |
SEH53161.1 | SEH37020.1 | SAMN05421793_1101 | SAMN05421793_101124 | OmpA-OmpF porin, OOP family. | Chemotaxis protein MotB. | 0.594 |
SEH53161.1 | SEH45650.1 | SAMN05421793_1101 | SAMN05421793_10545 | OmpA-OmpF porin, OOP family. | Nicotinamide-nucleotide amidase; Belongs to the CinA family. | 0.466 |
SEH53161.1 | SEH52446.1 | SAMN05421793_1101 | SAMN05421793_10957 | OmpA-OmpF porin, OOP family. | Protein of unknown function. | 0.727 |
SEH53161.1 | SEH61368.1 | SAMN05421793_1101 | SAMN05421793_11527 | OmpA-OmpF porin, OOP family. | ABC-type branched-chain amino acid transport system, substrate-binding protein. | 0.717 |
SEH53161.1 | SEH72372.1 | SAMN05421793_1101 | SAMN05421793_12325 | OmpA-OmpF porin, OOP family. | Hypothetical protein. | 0.407 |
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