STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH84236.1Glycosyl transferase family 2. (303 aa)    
Predicted Functional Partners:
SEH80919.1
Tetratricopeptide repeat-containing protein.
 
 
 0.879
SEH36777.1
Hypothetical protein.
  
 
 0.848
SEH47684.1
Glycosyltransferase involved in cell wall bisynthesis.
 
  
 0.845
SEH73140.1
Tetratricopeptide repeat-containing protein.
  
 
 0.815
SEH75401.1
Tetratricopeptide repeat-containing protein.
  
 
 0.799
SEH75418.1
Hypothetical protein.
  
 
 0.799
SEH50658.1
Tetratricopeptide repeat-containing protein.
  
 
 0.786
SEH60039.1
Hypothetical protein.
  
 
 0.786
SEH66083.1
Hypothetical protein.
  
 
 0.786
SEH75708.1
Tetratricopeptide repeat-containing protein.
  
 
 0.786
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.