Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH44051.1 | SEH50239.1 | SAMN05421793_10458 | SAMN05421793_1087 | Lipopolysaccharide export system permease protein. | Lipopolysaccharide export system ATP-binding protein. | 0.983 |
SEH44051.1 | SEH71144.1 | SAMN05421793_10458 | SAMN05421793_12223 | Lipopolysaccharide export system permease protein. | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | 0.762 |
SEH44051.1 | SEH80803.1 | SAMN05421793_10458 | SAMN05421793_13315 | Lipopolysaccharide export system permease protein. | Beta-barrel assembly machine subunit BamA. | 0.710 |
SEH44051.1 | SEH86625.1 | SAMN05421793_10458 | SAMN05421793_1429 | Lipopolysaccharide export system permease protein. | Rod shape-determining protein MreC. | 0.662 |
SEH44051.1 | SEH91535.1 | SAMN05421793_10458 | SAMN05421793_1518 | Lipopolysaccharide export system permease protein. | Lipopolysaccharide export system permease protein. | 0.975 |
SEH44051.1 | fabZ | SAMN05421793_10458 | SAMN05421793_11138 | Lipopolysaccharide export system permease protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.746 |
SEH50239.1 | SEH44051.1 | SAMN05421793_1087 | SAMN05421793_10458 | Lipopolysaccharide export system ATP-binding protein. | Lipopolysaccharide export system permease protein. | 0.983 |
SEH50239.1 | SEH80803.1 | SAMN05421793_1087 | SAMN05421793_13315 | Lipopolysaccharide export system ATP-binding protein. | Beta-barrel assembly machine subunit BamA. | 0.532 |
SEH50239.1 | SEH91535.1 | SAMN05421793_1087 | SAMN05421793_1518 | Lipopolysaccharide export system ATP-binding protein. | Lipopolysaccharide export system permease protein. | 0.988 |
SEH50239.1 | fabZ | SAMN05421793_1087 | SAMN05421793_11138 | Lipopolysaccharide export system ATP-binding protein. | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.649 |
SEH71144.1 | SEH44051.1 | SAMN05421793_12223 | SAMN05421793_10458 | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | Lipopolysaccharide export system permease protein. | 0.762 |
SEH71144.1 | SEH80803.1 | SAMN05421793_12223 | SAMN05421793_13315 | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | Beta-barrel assembly machine subunit BamA. | 0.725 |
SEH71144.1 | SEH86625.1 | SAMN05421793_12223 | SAMN05421793_1429 | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | Rod shape-determining protein MreC. | 0.609 |
SEH71144.1 | SEH91535.1 | SAMN05421793_12223 | SAMN05421793_1518 | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | Lipopolysaccharide export system permease protein. | 0.574 |
SEH71144.1 | fabZ | SAMN05421793_12223 | SAMN05421793_11138 | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | 3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily. | 0.551 |
SEH80803.1 | SEH44051.1 | SAMN05421793_13315 | SAMN05421793_10458 | Beta-barrel assembly machine subunit BamA. | Lipopolysaccharide export system permease protein. | 0.710 |
SEH80803.1 | SEH50239.1 | SAMN05421793_13315 | SAMN05421793_1087 | Beta-barrel assembly machine subunit BamA. | Lipopolysaccharide export system ATP-binding protein. | 0.532 |
SEH80803.1 | SEH71144.1 | SAMN05421793_13315 | SAMN05421793_12223 | Beta-barrel assembly machine subunit BamA. | LPS assembly outer membrane protein LptD (organic solvent tolerance protein OstA). | 0.725 |
SEH80803.1 | SEH86625.1 | SAMN05421793_13315 | SAMN05421793_1429 | Beta-barrel assembly machine subunit BamA. | Rod shape-determining protein MreC. | 0.622 |
SEH80803.1 | SEH91535.1 | SAMN05421793_13315 | SAMN05421793_1518 | Beta-barrel assembly machine subunit BamA. | Lipopolysaccharide export system permease protein. | 0.700 |
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