STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH94293.1OmpA-OmpF porin, OOP family. (472 aa)    
Predicted Functional Partners:
SEH94281.1
OmpA-OmpF porin, OOP family.
 
    
0.711
SEH94305.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
       0.703
SEH61368.1
ABC-type branched-chain amino acid transport system, substrate-binding protein.
 
 
 0.685
SEH52446.1
Protein of unknown function.
  
   0.676
SEH55445.1
Outer membrane protein beta-barrel domain-containing protein.
  
   0.666
SEH66136.1
Hypothetical protein.
  
     0.651
SEH37020.1
Chemotaxis protein MotB.
  
 
 0.628
SEH87189.1
Integral membrane protein.
  
     0.596
SEH58177.1
Hypothetical protein.
  
     0.592
SEH94335.1
Hypothetical protein.
  
     0.588
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.