STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEH95806.1TonB-dependent receptor. (678 aa)    
Predicted Functional Partners:
SEH37969.1
TonB-dependent receptor.
 
     0.976
SEH95818.1
3-phytase.
 
   
 0.966
SEH36278.1
3',5'-cyclic AMP phosphodiesterase CpdA.
  
     0.598
SEH62472.1
Outer membrane protein TolC.
  
     0.598
SEH36267.1
TonB-linked outer membrane protein, SusC/RagA family.
  
     0.507
SEH95830.1
Nucleoside-diphosphate-sugar epimerase.
       0.501
SEH36272.1
Starch-binding associating with outer membrane.
  
     0.476
SEH58702.1
Starch-binding associating with outer membrane.
  
 
   0.469
SEH71530.1
Gliding motility-associated C-terminal domain-containing protein.
  
 
   0.468
SEH62456.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
     0.463
Your Current Organism:
Chryseobacterium hominis
NCBI taxonomy Id: 420404
Other names: C. hominis, CCUG 52711, CDC group II-c, CDC group II-h, CIP 109415, CIP 109575 [[Chryseobacterium arothri]], Chryseobacterium arothri, Chryseobacterium arothri Campbell et al. 2008, Chryseobacterium hominis Vaneechoutte et al. 2007, DSM 19326 [[Chryseobacterium arothri]], strain NF802, strain P2K6 [[Chryseobacterium arothri]]
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