Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEH47401.1 | SEH49313.1 | SAMN05421793_10633 | SAMN05421793_10735 | Purine-nucleoside phosphorylase. | Uridine phosphorylase. | 0.933 |
SEH47401.1 | SEH53793.1 | SAMN05421793_10633 | SAMN05421793_11048 | Purine-nucleoside phosphorylase. | Uridine kinase. | 0.479 |
SEH47401.1 | SEH71461.1 | SAMN05421793_10633 | SAMN05421793_12240 | Purine-nucleoside phosphorylase. | Deoxyadenosine/deoxycytidine kinase. | 0.898 |
SEH47401.1 | SEH93597.1 | SAMN05421793_10633 | SAMN05421793_1564 | Purine-nucleoside phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.751 |
SEH47401.1 | SEH93644.1 | SAMN05421793_10633 | SAMN05421793_1568 | Purine-nucleoside phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.961 |
SEH47401.1 | cdd | SAMN05421793_10633 | SAMN05421793_1713 | Purine-nucleoside phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.939 |
SEH47401.1 | tdk | SAMN05421793_10633 | SAMN05421793_12339 | Purine-nucleoside phosphorylase. | Thymidine kinase. | 0.921 |
SEH49313.1 | SEH47401.1 | SAMN05421793_10735 | SAMN05421793_10633 | Uridine phosphorylase. | Purine-nucleoside phosphorylase. | 0.933 |
SEH49313.1 | SEH53793.1 | SAMN05421793_10735 | SAMN05421793_11048 | Uridine phosphorylase. | Uridine kinase. | 0.914 |
SEH49313.1 | SEH71461.1 | SAMN05421793_10735 | SAMN05421793_12240 | Uridine phosphorylase. | Deoxyadenosine/deoxycytidine kinase. | 0.425 |
SEH49313.1 | SEH93597.1 | SAMN05421793_10735 | SAMN05421793_1564 | Uridine phosphorylase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.543 |
SEH49313.1 | SEH93644.1 | SAMN05421793_10735 | SAMN05421793_1568 | Uridine phosphorylase. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.922 |
SEH49313.1 | cdd | SAMN05421793_10735 | SAMN05421793_1713 | Uridine phosphorylase. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.982 |
SEH49313.1 | surE | SAMN05421793_10735 | SAMN05421793_1552 | Uridine phosphorylase. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.897 |
SEH49313.1 | tdk | SAMN05421793_10735 | SAMN05421793_12339 | Uridine phosphorylase. | Thymidine kinase. | 0.910 |
SEH50528.1 | SEH53793.1 | SAMN05421793_10829 | SAMN05421793_11048 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Uridine kinase. | 0.898 |
SEH50528.1 | SEH93644.1 | SAMN05421793_10829 | SAMN05421793_1568 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate. | 0.899 |
SEH50528.1 | cdd | SAMN05421793_10829 | SAMN05421793_1713 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. | 0.898 |
SEH50528.1 | surE | SAMN05421793_10829 | SAMN05421793_1552 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.900 |
SEH50528.1 | tdk | SAMN05421793_10829 | SAMN05421793_12339 | 5'-nucleotidase; Belongs to the 5'-nucleotidase family. | Thymidine kinase. | 0.916 |
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