STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A0670Sensor histidine kinase/response regulator. (1170 aa)    
Predicted Functional Partners:
pilL
Twitching motility protein.
 
 
 0.967
Mpe_A0812
PAS/PAC sensor hybrid histidine kinase.
  
 
0.952
Mpe_A2858
Signal transduction histidine kinase-like protein.
 
 
0.941
Mpe_A2447
Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain.
  
 
 0.939
Mpe_A0099
Signal transduction histidine kinase-like protein.
 
 
0.935
Mpe_A2494
Signal transduction histidine kinase-like protein.
 
 
0.933
Mpe_A3690
PAS/PAC sensor hybrid histidine kinase.
 
 
0.933
Mpe_A0998
PleD.
  
 
 0.930
Mpe_A0749
Sensory box histidine kinase.
  
 
0.925
Mpe_A0671
Two component transcriptional regulator, LuxR family.
 
0.909
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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