STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ureDUreD-family accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. (341 aa)    
Predicted Functional Partners:
ureF
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
 
 0.990
ureB
Urease; Belongs to the urease beta subunit family.
 
 
 0.968
ureA
Urease; Belongs to the urease gamma subunit family.
 
 
 0.946
ureG
Urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
 
 
 0.939
ureE
Putative urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.918
ureC
Urease; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
 
  
 0.887
Mpe_A2815
Hydrogenase-3 accessory protein, assembly of metallocenter.
  
 
 0.765
Mpe_A0697
Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein.
 
   
 0.608
Mpe_A0670
Sensor histidine kinase/response regulator.
 
 
 
 0.597
Mpe_A0699
Putative permease transporter transmembrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
 0.594
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.