Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mpe_A0820 | Mpe_A0821 | Mpe_A0820 | Mpe_A0821 | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | Long-chain fatty acid transport like protein. | 0.620 |
Mpe_A0820 | mcp-3 | Mpe_A0820 | Mpe_A0822 | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | Methyl-accepting chemotaxis protein. | 0.402 |
Mpe_A0820 | tbuA2 | Mpe_A0820 | Mpe_A0818 | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | Toluene monooxygenase beta subunit. | 0.545 |
Mpe_A0820 | tbuC | Mpe_A0820 | Mpe_A0819 | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | Toluene monooxygenase oxidoreductase. | 0.755 |
Mpe_A0820 | tbuV | Mpe_A0820 | Mpe_A0817 | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | Toluene monooxygenase activator. | 0.463 |
Mpe_A0821 | Mpe_A0820 | Mpe_A0821 | Mpe_A0820 | Long-chain fatty acid transport like protein. | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | 0.620 |
Mpe_A0821 | Mpe_A2367 | Mpe_A0821 | Mpe_A2367 | Long-chain fatty acid transport like protein. | Conserved hypothetical protein. | 0.438 |
Mpe_A0821 | mcp-3 | Mpe_A0821 | Mpe_A0822 | Long-chain fatty acid transport like protein. | Methyl-accepting chemotaxis protein. | 0.486 |
Mpe_A0821 | tbuA2 | Mpe_A0821 | Mpe_A0818 | Long-chain fatty acid transport like protein. | Toluene monooxygenase beta subunit. | 0.513 |
Mpe_A0821 | tbuC | Mpe_A0821 | Mpe_A0819 | Long-chain fatty acid transport like protein. | Toluene monooxygenase oxidoreductase. | 0.545 |
Mpe_A0821 | tbuV | Mpe_A0821 | Mpe_A0817 | Long-chain fatty acid transport like protein. | Toluene monooxygenase activator. | 0.513 |
Mpe_A2367 | Mpe_A0821 | Mpe_A2367 | Mpe_A0821 | Conserved hypothetical protein. | Long-chain fatty acid transport like protein. | 0.438 |
mcp-3 | Mpe_A0820 | Mpe_A0822 | Mpe_A0820 | Methyl-accepting chemotaxis protein. | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | 0.402 |
mcp-3 | Mpe_A0821 | Mpe_A0822 | Mpe_A0821 | Methyl-accepting chemotaxis protein. | Long-chain fatty acid transport like protein. | 0.486 |
tbuA2 | Mpe_A0820 | Mpe_A0818 | Mpe_A0820 | Toluene monooxygenase beta subunit. | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | 0.545 |
tbuA2 | Mpe_A0821 | Mpe_A0818 | Mpe_A0821 | Toluene monooxygenase beta subunit. | Long-chain fatty acid transport like protein. | 0.513 |
tbuA2 | tbuC | Mpe_A0818 | Mpe_A0819 | Toluene monooxygenase beta subunit. | Toluene monooxygenase oxidoreductase. | 0.829 |
tbuA2 | tbuV | Mpe_A0818 | Mpe_A0817 | Toluene monooxygenase beta subunit. | Toluene monooxygenase activator. | 0.940 |
tbuC | Mpe_A0820 | Mpe_A0819 | Mpe_A0820 | Toluene monooxygenase oxidoreductase. | Conserved hypothetical zinc-type alcohol dehydrogenase-like protein. | 0.755 |
tbuC | Mpe_A0821 | Mpe_A0819 | Mpe_A0821 | Toluene monooxygenase oxidoreductase. | Long-chain fatty acid transport like protein. | 0.545 |
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