STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A0825Transcriptional regulator, TetR family. (222 aa)    
Predicted Functional Partners:
Mpe_A0824
Hypothetical protein.
 
 
 
 0.908
Mpe_A0490
Polygranule-associated protein.
 
     0.777
Mpe_A0488
Alpha-beta hydrolase superfamily esterase-like protein.
 
     0.650
Mpe_A0491
Conserved hypothetical short chain dehydrogenase.
 
   
 0.640
Mpe_A0823
Conserved hypothetical protein.
       0.625
Mpe_A0826
Putative ATP-binding ABC transporter protein.
     
 0.570
Mpe_A0352
Hypothetical protein.
  
     0.568
Mpe_A2844
Conserved hypothetical protein.
  
    0.538
Mpe_A3084
Diacylglycerol O-acyltransferase.
  
     0.537
Mpe_A0288
Putative membrane protein.
  
     0.472
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.