STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A0977ABC transporter permease protein. (255 aa)    
Predicted Functional Partners:
Mpe_A0978
ABC transporter, ATP-binding protein.
  
 0.969
Mpe_A0826
Putative ATP-binding ABC transporter protein.
 
  
 0.828
Mpe_A0931
Conserved hypothetical protein.
  
  
 0.550
Mpe_A0731
Nitroreductase-like protein.
  
  
 0.548
Mpe_A0979
Conserved hypothetical protein.
  
    0.534
Mpe_A0980
Hypothetical protein.
       0.522
Mpe_A0981
Hypothetical protein.
       0.486
Mpe_A2590
Efflux ABC transporter, permease protein.
  
  
  0.449
Mpe_A0827
Putative transmembrane protein.
  
  
 
0.432
Mpe_A2589
ABC efflux transporter, ATP-binding protein.
 
  
 0.408
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.