STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A0989Putative ring-hydroxylation complex protein 2. (257 aa)    
Predicted Functional Partners:
Mpe_A0987
Putative phenylacetic acid degradation protein.
 0.999
Mpe_A0988
Conserved hypothetical protein.
 
 0.999
Mpe_A0990
Putative ring oxidation complex protein 3.
 
 
 0.998
Mpe_A0991
Putative ring-hydroxylation complex protein 4.
 
 0.997
Mpe_A0985
Phenylacetic acid degradation protein.
 
 
 0.995
Mpe_A0986
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.990
Mpe_A0984
Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.986
Mpe_A0893
Enoyl-CoA hydratase.
  
 
 0.954
Mpe_A0016
Coenzyme F390 synthetase-like protein.
 
 
 0.930
Mpe_A0992
Putative transcriptional regulator of paa operon.
 
   
 0.879
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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