Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mpe_A1083 | Mpe_A1606 | Mpe_A1083 | Mpe_A1606 | Putative molybdopterin biosynthesis protein. | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | 0.966 |
Mpe_A1083 | Mpe_A1608 | Mpe_A1083 | Mpe_A1608 | Putative molybdopterin biosynthesis protein. | Sulfur transfer protein; Involved in thiamine biosynthesis. | 0.877 |
Mpe_A1083 | Mpe_A2579 | Mpe_A1083 | Mpe_A2579 | Putative molybdopterin biosynthesis protein. | Hypothetical protein. | 0.760 |
Mpe_A1083 | Mpe_A3192 | Mpe_A1083 | Mpe_A3192 | Putative molybdopterin biosynthesis protein. | Hydroxymethylpyrimidine kinase. | 0.633 |
Mpe_A1083 | thiC | Mpe_A1083 | Mpe_A1610 | Putative molybdopterin biosynthesis protein. | Thiamin biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.759 |
Mpe_A1083 | thiG | Mpe_A1083 | Mpe_A1607 | Putative molybdopterin biosynthesis protein. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.919 |
Mpe_A1606 | Mpe_A1083 | Mpe_A1606 | Mpe_A1083 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Putative molybdopterin biosynthesis protein. | 0.966 |
Mpe_A1606 | Mpe_A1608 | Mpe_A1606 | Mpe_A1608 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Sulfur transfer protein; Involved in thiamine biosynthesis. | 0.977 |
Mpe_A1606 | Mpe_A2369 | Mpe_A1606 | Mpe_A2369 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Hypothetical protein. | 0.953 |
Mpe_A1606 | Mpe_A2579 | Mpe_A1606 | Mpe_A2579 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Hypothetical protein. | 0.940 |
Mpe_A1606 | Mpe_A3192 | Mpe_A1606 | Mpe_A3192 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Hydroxymethylpyrimidine kinase. | 0.991 |
Mpe_A1606 | rsgA | Mpe_A1606 | Mpe_A2914 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Putative ATP/GTP-binding protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily. | 0.922 |
Mpe_A1606 | thiC | Mpe_A1606 | Mpe_A1610 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Thiamin biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.999 |
Mpe_A1606 | thiG | Mpe_A1606 | Mpe_A1607 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Thiamine biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S. | 0.998 |
Mpe_A1606 | thiL | Mpe_A1606 | Mpe_A0210 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.949 |
Mpe_A1606 | thiL-2 | Mpe_A1606 | Mpe_A1597 | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family. | 0.957 |
Mpe_A1608 | Mpe_A1083 | Mpe_A1608 | Mpe_A1083 | Sulfur transfer protein; Involved in thiamine biosynthesis. | Putative molybdopterin biosynthesis protein. | 0.877 |
Mpe_A1608 | Mpe_A1606 | Mpe_A1608 | Mpe_A1606 | Sulfur transfer protein; Involved in thiamine biosynthesis. | Phosphomethylpyrimidine kinase / thiamine-phosphate pyrophosphorylase. | 0.977 |
Mpe_A1608 | Mpe_A2369 | Mpe_A1608 | Mpe_A2369 | Sulfur transfer protein; Involved in thiamine biosynthesis. | Hypothetical protein. | 0.760 |
Mpe_A1608 | Mpe_A3192 | Mpe_A1608 | Mpe_A3192 | Sulfur transfer protein; Involved in thiamine biosynthesis. | Hydroxymethylpyrimidine kinase. | 0.642 |
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