Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mpe_A1623 | Mpe_A1624 | Mpe_A1623 | Mpe_A1624 | Integrase or site-specific recombinase; Belongs to the 'phage' integrase family. | Conserved hypothetical transmembrane protein. | 0.512 |
Mpe_A1623 | Mpe_A2332 | Mpe_A1623 | Mpe_A2332 | Integrase or site-specific recombinase; Belongs to the 'phage' integrase family. | Phage transcriptional regulator, AlpA. | 0.436 |
Mpe_A1623 | guaA | Mpe_A1623 | Mpe_A1622 | Integrase or site-specific recombinase; Belongs to the 'phage' integrase family. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.577 |
Mpe_A1624 | Mpe_A1623 | Mpe_A1624 | Mpe_A1623 | Conserved hypothetical transmembrane protein. | Integrase or site-specific recombinase; Belongs to the 'phage' integrase family. | 0.512 |
Mpe_A2332 | Mpe_A1623 | Mpe_A2332 | Mpe_A1623 | Phage transcriptional regulator, AlpA. | Integrase or site-specific recombinase; Belongs to the 'phage' integrase family. | 0.436 |
guaA | Mpe_A1623 | Mpe_A1622 | Mpe_A1623 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Integrase or site-specific recombinase; Belongs to the 'phage' integrase family. | 0.577 |