STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A1633Putative copper resistance-related lipoprotein. (479 aa)    
Predicted Functional Partners:
Mpe_A1634
Putative exported copper oxidase.
 
   
 0.949
Mpe_A1637
Conserved hypothetical protein.
 
 
 0.919
copI
Oxidoreductase; Cu binding protein.
 
     0.890
Mpe_A0493
Conserved hypothetical protein.
 
 
 0.821
copA2
multi-Cu oxidase; Cu chelation.
 
   
 0.786
macB
Transmembrane ATP-binding ABC transporter protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.737
copA1
multi-Cu oxidase; Cu chelation.
       0.659
Mpe_A1636
Conserved hypothetical protein.
       0.585
Mpe_A3794
Membrane-fusion protein.
 
 
 0.550
Mpe_A1626
Putative cation efflux system transmembrane protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.520
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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