Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mpe_A2639 | Mpe_A2641 | Mpe_A2639 | Mpe_A2641 | Hypothetical protein. | Hypothetical protein. | 0.546 |
Mpe_A2639 | trpS | Mpe_A2639 | Mpe_A2640 | Hypothetical protein. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.598 |
Mpe_A2641 | Mpe_A2639 | Mpe_A2641 | Mpe_A2639 | Hypothetical protein. | Hypothetical protein. | 0.546 |
Mpe_A2641 | trpS | Mpe_A2641 | Mpe_A2640 | Hypothetical protein. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.770 |
argS | guaA | Mpe_A0153 | Mpe_A1622 | arginyl-tRNA synthetase. | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | 0.952 |
argS | leuS | Mpe_A0153 | Mpe_A0218 | arginyl-tRNA synthetase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.898 |
argS | lysS | Mpe_A0153 | Mpe_A0600 | arginyl-tRNA synthetase. | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.893 |
argS | metG | Mpe_A0153 | Mpe_A1161 | arginyl-tRNA synthetase. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.936 |
argS | pheT | Mpe_A0153 | Mpe_A1883 | arginyl-tRNA synthetase. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.852 |
argS | purL | Mpe_A0153 | Mpe_A1761 | arginyl-tRNA synthetase. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.651 |
argS | serS | Mpe_A0153 | Mpe_A2692 | arginyl-tRNA synthetase. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.618 |
argS | trpS | Mpe_A0153 | Mpe_A2640 | arginyl-tRNA synthetase. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.587 |
guaA | argS | Mpe_A1622 | Mpe_A0153 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | arginyl-tRNA synthetase. | 0.952 |
guaA | leuS | Mpe_A1622 | Mpe_A0218 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.601 |
guaA | lysS | Mpe_A1622 | Mpe_A0600 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.957 |
guaA | metG | Mpe_A1622 | Mpe_A1161 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.809 |
guaA | pheT | Mpe_A1622 | Mpe_A1883 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.919 |
guaA | purL | Mpe_A1622 | Mpe_A1761 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.974 |
guaA | serS | Mpe_A1622 | Mpe_A2692 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec). | 0.589 |
guaA | trpS | Mpe_A1622 | Mpe_A2640 | GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP. | tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.585 |
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