Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Mpe_A0148 | Mpe_A2447 | Mpe_A0148 | Mpe_A2447 | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | 0.517 |
| Mpe_A0148 | Mpe_A2494 | Mpe_A0148 | Mpe_A2494 | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase-like protein. | 0.498 |
| Mpe_A0148 | Mpe_A2858 | Mpe_A0148 | Mpe_A2858 | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Signal transduction histidine kinase-like protein. | 0.449 |
| Mpe_A0148 | Mpe_A3310 | Mpe_A0148 | Mpe_A3310 | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-binding protein Fis / transcriptional regulator, Fis family. | 0.798 |
| Mpe_A2447 | Mpe_A0148 | Mpe_A2447 | Mpe_A0148 | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.517 |
| Mpe_A2447 | Mpe_A2494 | Mpe_A2447 | Mpe_A2494 | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | Signal transduction histidine kinase-like protein. | 0.981 |
| Mpe_A2447 | Mpe_A2858 | Mpe_A2447 | Mpe_A2858 | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | Signal transduction histidine kinase-like protein. | 0.994 |
| Mpe_A2447 | Mpe_A3310 | Mpe_A2447 | Mpe_A3310 | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | DNA-binding protein Fis / transcriptional regulator, Fis family. | 0.533 |
| Mpe_A2494 | Mpe_A0148 | Mpe_A2494 | Mpe_A0148 | Signal transduction histidine kinase-like protein. | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.498 |
| Mpe_A2494 | Mpe_A2447 | Mpe_A2494 | Mpe_A2447 | Signal transduction histidine kinase-like protein. | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | 0.981 |
| Mpe_A2494 | Mpe_A2858 | Mpe_A2494 | Mpe_A2858 | Signal transduction histidine kinase-like protein. | Signal transduction histidine kinase-like protein. | 0.973 |
| Mpe_A2494 | Mpe_A3310 | Mpe_A2494 | Mpe_A3310 | Signal transduction histidine kinase-like protein. | DNA-binding protein Fis / transcriptional regulator, Fis family. | 0.525 |
| Mpe_A2858 | Mpe_A0148 | Mpe_A2858 | Mpe_A0148 | Signal transduction histidine kinase-like protein. | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.449 |
| Mpe_A2858 | Mpe_A2447 | Mpe_A2858 | Mpe_A2447 | Signal transduction histidine kinase-like protein. | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | 0.994 |
| Mpe_A2858 | Mpe_A2494 | Mpe_A2858 | Mpe_A2494 | Signal transduction histidine kinase-like protein. | Signal transduction histidine kinase-like protein. | 0.973 |
| Mpe_A2858 | Mpe_A3310 | Mpe_A2858 | Mpe_A3310 | Signal transduction histidine kinase-like protein. | DNA-binding protein Fis / transcriptional regulator, Fis family. | 0.528 |
| Mpe_A3310 | Mpe_A0148 | Mpe_A3310 | Mpe_A0148 | DNA-binding protein Fis / transcriptional regulator, Fis family. | Putative RNA polymerase sigma N (sigma 54) factor transcription regulator protein; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.798 |
| Mpe_A3310 | Mpe_A2447 | Mpe_A3310 | Mpe_A2447 | DNA-binding protein Fis / transcriptional regulator, Fis family. | Signal transduction protein; Containing a membrane domain an EAL and a GGDEF domain. | 0.533 |
| Mpe_A3310 | Mpe_A2494 | Mpe_A3310 | Mpe_A2494 | DNA-binding protein Fis / transcriptional regulator, Fis family. | Signal transduction histidine kinase-like protein. | 0.525 |
| Mpe_A3310 | Mpe_A2858 | Mpe_A3310 | Mpe_A2858 | DNA-binding protein Fis / transcriptional regulator, Fis family. | Signal transduction histidine kinase-like protein. | 0.528 |
page 1 of 4