Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mpe_A0725 | Mpe_A0948 | Mpe_A0725 | Mpe_A0948 | Hypothetical protein. | WD-repeat family protein. | 0.826 |
Mpe_A0725 | Mpe_A3493 | Mpe_A0725 | Mpe_A3493 | Hypothetical protein. | Metallo-beta-lactamase family protein. | 0.591 |
Mpe_A0725 | polA | Mpe_A0725 | Mpe_A1148 | Hypothetical protein. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.402 |
Mpe_A0948 | Mpe_A0725 | Mpe_A0948 | Mpe_A0725 | WD-repeat family protein. | Hypothetical protein. | 0.826 |
Mpe_A0948 | Mpe_A2854 | Mpe_A0948 | Mpe_A2854 | WD-repeat family protein. | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.826 |
Mpe_A0948 | Mpe_A3493 | Mpe_A0948 | Mpe_A3493 | WD-repeat family protein. | Metallo-beta-lactamase family protein. | 0.900 |
Mpe_A0948 | Mpe_A3805 | Mpe_A0948 | Mpe_A3805 | WD-repeat family protein. | RNA-binding region RNP-1. | 0.856 |
Mpe_A0948 | polA | Mpe_A0948 | Mpe_A1148 | WD-repeat family protein. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.403 |
Mpe_A0948 | rpoA | Mpe_A0948 | Mpe_A3417 | WD-repeat family protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.782 |
Mpe_A0948 | rpoB | Mpe_A0948 | Mpe_A3451 | WD-repeat family protein. | DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.818 |
Mpe_A0948 | rpoZ | Mpe_A0948 | Mpe_A2716 | WD-repeat family protein. | DNA-directed RNA polymerase omega chain; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.786 |
Mpe_A2854 | Mpe_A0948 | Mpe_A2854 | Mpe_A0948 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | WD-repeat family protein. | 0.826 |
Mpe_A2854 | Mpe_A3493 | Mpe_A2854 | Mpe_A3493 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | Metallo-beta-lactamase family protein. | 0.591 |
Mpe_A2854 | polA | Mpe_A2854 | Mpe_A1148 | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | DNA-directed DNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.402 |
Mpe_A3492 | Mpe_A3493 | Mpe_A3492 | Mpe_A3493 | Putative transmembrane protein. | Metallo-beta-lactamase family protein. | 0.827 |
Mpe_A3492 | Mpe_A3495 | Mpe_A3492 | Mpe_A3495 | Putative transmembrane protein. | Signal transduction histidine kinase-like protein. | 0.547 |
Mpe_A3493 | Mpe_A0725 | Mpe_A3493 | Mpe_A0725 | Metallo-beta-lactamase family protein. | Hypothetical protein. | 0.591 |
Mpe_A3493 | Mpe_A0948 | Mpe_A3493 | Mpe_A0948 | Metallo-beta-lactamase family protein. | WD-repeat family protein. | 0.900 |
Mpe_A3493 | Mpe_A2854 | Mpe_A3493 | Mpe_A2854 | Metallo-beta-lactamase family protein. | Bis(5'-nucleosyl)-tetraphosphatase (symmetrical); Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family. | 0.591 |
Mpe_A3493 | Mpe_A3492 | Mpe_A3493 | Mpe_A3492 | Metallo-beta-lactamase family protein. | Putative transmembrane protein. | 0.827 |
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