Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Mpe_A0707 | Mpe_A0709 | Mpe_A0707 | Mpe_A0709 | Bifunctional regulator/uracil phosphoribosyltransferase. | Dihydroorotase. | 0.997 |
Mpe_A0707 | carA | Mpe_A0707 | Mpe_A1261 | Bifunctional regulator/uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.862 |
Mpe_A0707 | carB | Mpe_A0707 | Mpe_A1262 | Bifunctional regulator/uracil phosphoribosyltransferase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.911 |
Mpe_A0707 | pyrB | Mpe_A0707 | Mpe_A0708 | Bifunctional regulator/uracil phosphoribosyltransferase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.997 |
Mpe_A0707 | pyrD | Mpe_A0707 | Mpe_A2138 | Bifunctional regulator/uracil phosphoribosyltransferase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.746 |
Mpe_A0707 | pyrE | Mpe_A0707 | Mpe_A0088 | Bifunctional regulator/uracil phosphoribosyltransferase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.892 |
Mpe_A0707 | pyrF | Mpe_A0707 | Mpe_A3625 | Bifunctional regulator/uracil phosphoribosyltransferase. | Putative orotidine 5'-phosphate decarboxylase protein; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.988 |
Mpe_A0707 | pyrH | Mpe_A0707 | Mpe_A1977 | Bifunctional regulator/uracil phosphoribosyltransferase. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.940 |
Mpe_A0707 | surE | Mpe_A0707 | Mpe_A1252 | Bifunctional regulator/uracil phosphoribosyltransferase. | Exopolyphosphatase / 3'-nucleotidase / 5'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. | 0.921 |
Mpe_A0707 | upp | Mpe_A0707 | Mpe_A1818 | Bifunctional regulator/uracil phosphoribosyltransferase. | Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate. | 0.930 |
Mpe_A0709 | Mpe_A0707 | Mpe_A0709 | Mpe_A0707 | Dihydroorotase. | Bifunctional regulator/uracil phosphoribosyltransferase. | 0.997 |
Mpe_A0709 | carA | Mpe_A0709 | Mpe_A1261 | Dihydroorotase. | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | 0.973 |
Mpe_A0709 | carB | Mpe_A0709 | Mpe_A1262 | Dihydroorotase. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.975 |
Mpe_A0709 | pyrB | Mpe_A0709 | Mpe_A0708 | Dihydroorotase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.999 |
Mpe_A0709 | pyrD | Mpe_A0709 | Mpe_A2138 | Dihydroorotase. | Dihydroorotate oxidase A; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. | 0.994 |
Mpe_A0709 | pyrE | Mpe_A0709 | Mpe_A0088 | Dihydroorotase. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.943 |
Mpe_A0709 | pyrF | Mpe_A0709 | Mpe_A3625 | Dihydroorotase. | Putative orotidine 5'-phosphate decarboxylase protein; Belongs to the OMP decarboxylase family. Type 2 subfamily. | 0.943 |
carA | Mpe_A0707 | Mpe_A1261 | Mpe_A0707 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Bifunctional regulator/uracil phosphoribosyltransferase. | 0.862 |
carA | Mpe_A0709 | Mpe_A1261 | Mpe_A0709 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Dihydroorotase. | 0.973 |
carA | carB | Mpe_A1261 | Mpe_A1262 | Carbamoyl-phosphate synthase small subunit; Belongs to the CarA family. | Carbamoyl-phosphate synthase large subunit; Belongs to the CarB family. | 0.999 |
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