STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A3796Putative LuxR-family transcriptional regulator. (237 aa)    
Predicted Functional Partners:
Mpe_A0092
Putative metallo-beta-lactamase family protein.
    
 
 0.676
Mpe_A3797
Hypothetical protein.
       0.517
Mpe_A1734
ATPase-like protein.
  
 
 0.464
Mpe_A3167
Signal transduction histidine kinase-like protein.
  
  
 0.426
Mpe_A2858
Signal transduction histidine kinase-like protein.
   
  
 0.415
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.