STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0000467Putative methionine synthase. (372 aa)    
Predicted Functional Partners:
BK809_0000842
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 0.972
BK809_0003213
Adenosylhomocysteinase.
  
 
 0.951
BK809_0005533
Putative cystathionine beta-lyase.
  
 
 0.938
BK809_0002165
Cystathionine gamma-synthase.
  
 
 0.938
BK809_0003696
Putative trans-sulfuration enzyme.
  
 
 0.938
BK809_0007501
Cystathionine gamma-lyase.
  
 
 0.938
BK809_0007294
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.901
BK809_0005458
Putative homocysteine s-methyltransferase.
  
 
 0.899
BK809_0003283
Homocysteine S-methyltransferase.
  
 
 0.899
BK809_0005059
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.893
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.